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Ch. 19 - Epigenetics
Chapter 18, Problem 24

A particular type of anemia in humans, called β-thalassemia, results from a severe reduction or absence of the normal β-globin chain of hemoglobin. However, the γ-globin chain, normally only expressed during fetal development, can functionally substitute for β-globin. A variety of studies have explored the use of the nucleoside 5-azacytidine for the expression of γ-globin in adult patients with β-thalassemia.

Explain why this drug may also have some adverse side effects.

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1
Understand that β-thalassemia is caused by a deficiency in the β-globin chain of hemoglobin, which is crucial for oxygen transport in adults.
Recognize that 5-azacytidine is a nucleoside analog that can induce the expression of γ-globin, which is normally expressed during fetal development, to compensate for the lack of β-globin.
Consider that 5-azacytidine works by incorporating into DNA and inhibiting DNA methylation, which can lead to the reactivation of fetal γ-globin genes in adult cells.
Acknowledge that while reactivating γ-globin can be beneficial for β-thalassemia patients, the demethylation effect of 5-azacytidine is not specific and can affect other genes, potentially leading to unintended gene expression changes.
Realize that these unintended changes in gene expression could result in adverse side effects, such as the activation of oncogenes or suppression of tumor suppressor genes, increasing the risk of cancer.

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

β-thalassemia

β-thalassemia is a genetic blood disorder characterized by reduced or absent production of the β-globin chain of hemoglobin, leading to anemia. This condition results from mutations in the HBB gene, which encodes the β-globin subunit. The lack of β-globin causes an imbalance in hemoglobin composition, resulting in ineffective erythropoiesis and hemolysis, which can lead to severe health complications.

γ-globin chain

The γ-globin chain is a component of fetal hemoglobin (HbF), which is predominantly produced during fetal development. In adults, the expression of γ-globin is typically suppressed, but it can substitute for β-globin in conditions like β-thalassemia. Therapeutic strategies, such as using 5-azacytidine, aim to reactivate γ-globin production in adults, potentially alleviating symptoms of the disease by improving hemoglobin function.
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5-azacytidine

5-azacytidine is a nucleoside analog that acts as a demethylating agent, influencing gene expression by altering DNA methylation patterns. This drug has been studied for its ability to induce the expression of γ-globin in patients with β-thalassemia. However, its use can lead to adverse side effects, such as cytotoxicity and potential impacts on normal hematopoiesis, due to its broad effects on gene regulation and cellular processes.
Related Practice
Textbook Question

Amino acids are classified as positively charged, negatively charged, or electrically neutral.

Which category includes lysine?

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Textbook Question

Amino acids are classified as positively charged, negatively charged, or electrically neutral.

How does this property of lysine allow it to interact with DNA?

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Textbook Question

Amino acids are classified as positively charged, negatively charged, or electrically neutral.

How does acetylation of lysine affect its interaction with DNA, and how is this related to the activation of gene expression?

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Textbook Question

A particular type of anemia in humans, called β-thalassemia, results from a severe reduction or absence of the normal β-globin chain of hemoglobin. However, the γ-globin chain, normally only expressed during fetal development, can functionally substitute for β-globin. A variety of studies have explored the use of the nucleoside 5-azacytidine for the expression of γ-globin in adult patients with β-thalassemia.

How might 5-azacytidine lead to expression of γ-globin in adult patients?

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Textbook Question

Methylation of H3K9 by itself silences genes, but if H3K4 and H4K20 are also methylated, the combination of modifications stimulates transcription. What conclusions can you draw about this?

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Textbook Question

DNA methylation is commonly associated with a reduction of transcription. The following data come from a study of the impact of the location and extent of DNA methylation on gene activity in eukaryotic cells. A bacterial gene, luciferase, was inserted into plasmids next to eukaryotic promoter fragments. CpG sequences, either within the promoter and coding sequence (transcription unit) or outside of the transcription unit, were methylated to various degrees, in vitro. The chimeric plasmids were then introduced into cultured cells, and luciferase activity was assayed. These data compare the degree of expression of luciferase with differences in the location of DNA methylation [Irvine et al. (2002). Mol. and Cell. Biol. 22:6689–6696]. What general conclusions can be drawn from these data? 


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