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Ch.26 Nucleic Acids and Protein Synthesis
Chapter 26, Problem 26.74

Suppose that 22% of the nucleotides of a DNA molecule are deoxyadenosine and during replication the relative amounts of available deoxynucleoside triphosphates are 22% dATP, 22% dCTP, 28% dGTP, and 28% dTTP. What deoxynucleoside triphosphate is limiting to the replication? Explain.

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Understand that in DNA, adenine (A) pairs with thymine (T) and cytosine (C) pairs with guanine (G). Therefore, the percentage of adenine will equal the percentage of thymine, and the percentage of cytosine will equal the percentage of guanine.
Given that 22% of the nucleotides are deoxyadenosine (A), it follows that 22% of the nucleotides must be deoxythymidine (T) as well, due to base pairing rules.
Calculate the percentage of cytosine (C) and guanine (G) in the DNA. Since A + T + C + G = 100%, and A = T = 22%, the remaining percentage for C and G together is 100% - 44% = 56%. Therefore, C = G = 28%.
Compare the available deoxynucleoside triphosphates (dNTPs) during replication: 22% dATP, 22% dCTP, 28% dGTP, and 28% dTTP. These percentages should ideally match the DNA composition for efficient replication.
Identify the limiting deoxynucleoside triphosphate by determining which dNTP is available in a lower percentage than required by the DNA composition. In this case, compare the required 28% dCTP with the available 22% dCTP, indicating that dCTP is the limiting factor.

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

Nucleotide Composition

Nucleotide composition refers to the relative amounts of the four types of nucleotides in a DNA molecule: deoxyadenosine (dA), deoxycytidine (dC), deoxyguanosine (dG), and deoxythymidine (dT). In this case, 22% of the nucleotides are dA, which indicates that during DNA replication, the availability of dATP (the triphosphate form of dA) is crucial for synthesizing new DNA strands.
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Deoxynucleoside Triphosphates (dNTPs)

Deoxynucleoside triphosphates (dNTPs) are the building blocks of DNA, consisting of a deoxyribose sugar, a nitrogenous base, and three phosphate groups. The relative concentrations of dATP, dCTP, dGTP, and dTTP during DNA replication determine which nucleotide is in excess and which is limiting. In this scenario, the percentages of each dNTP indicate that dATP and dCTP are available at 22%, while dGTP and dTTP are at 28%.
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Limiting Reagent

In biochemical reactions, a limiting reagent is the substance that is totally consumed when the reaction goes to completion, thus determining the maximum amount of product formed. In the context of DNA replication, the limiting dNTP will be the one present in the lowest relative concentration compared to the others. Here, since dATP and dCTP are at 22%, they are limiting compared to dGTP and dTTP, which are at 28%.
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