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Ch. 16 - Regulation of Gene Expression in Bacteria
Chapter 16, Problem 14

Neelaredoxin is a 15-kDa protein that is a gene product common in anaerobic bacteria. It has superoxide-scavenging activity, and it is constitutively expressed. In addition, its expression is not further induced during its exposure to O₂ or H₂O₂ [Silva, G. et al. (2001). J. Bacteriol. 183:4413–4420]. What do the terms constitutively expressed and induced mean in terms of neelaredoxin synthesis?

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Constitutively expressed means that the gene encoding neelaredoxin is continuously active, leading to the constant production of the protein regardless of environmental conditions.
Induced expression refers to the increase in gene expression in response to specific stimuli or environmental changes.
In the context of neelaredoxin, its constitutive expression implies that the protein is synthesized at a steady rate without the need for external signals.
The fact that neelaredoxin expression is not further induced by O₂ or H₂O₂ suggests that its synthesis is not upregulated in response to these oxidative stress conditions.
This indicates that neelaredoxin is always present in the cell to perform its superoxide-scavenging function, providing a constant defense mechanism against oxidative damage.

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

Constitutive Expression

Constitutive expression refers to the continuous production of a protein by a gene, regardless of environmental conditions. In the case of neelaredoxin, this means that the protein is synthesized at a constant rate in anaerobic bacteria without the need for specific stimuli. This is crucial for maintaining essential cellular functions, especially in environments where the protein's activity is necessary for survival.
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Inducible Expression

Inducible expression is a regulatory mechanism where the synthesis of a protein is increased in response to specific environmental signals or stressors. For neelaredoxin, the fact that its expression is not induced by O₂ or H₂O₂ indicates that its production does not rely on these oxidative stressors, highlighting its role in maintaining cellular homeostasis under anaerobic conditions.
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Gene Regulation

Gene regulation encompasses the mechanisms that control the timing and amount of gene expression. It is essential for organisms to adapt to changing environments. In the context of neelaredoxin, understanding gene regulation helps explain why this protein is constitutively expressed, allowing anaerobic bacteria to efficiently manage oxidative stress without needing to alter gene expression in response to oxygen or hydrogen peroxide.
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Related Practice
Textbook Question
Erythritol, a natural sugar abundant in fruits and fermenting foods, is about 65 percent as sweet as table sugar and has about 95 percent fewer calories. It is 'tooth friendly' and generally devoid of negative side effects as a human consumable product. Pathogenic Brucella strains that catabolize erythritol contain four closely spaced genes, all involved in erythritol metabolism. One of the four genes (eryD) encodes a product that represses the expression of the other three genes. Erythritol catabolism is stimulated by erythritol. Present a simple regulatory model to account for the regulation of erythritol catabolism in Brucella. Does this system appear to be under inducible or repressible control?
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Textbook Question
Describe the role of attenuation in the regulation of tryptophan biosynthesis.
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Textbook Question
Attenuation of the trp operon was viewed as a relatively inefficient way to achieve genetic regulation when it was first discovered in the 1970s. Since then, however, attenuation has been found to be a relatively common regulatory strategy. Assuming that attenuation is a relatively inefficient way to achieve genetic regulation, what might explain its widespread occurrence?
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Textbook Question
The creation of milk products such as cheeses and yogurts is dependent on the conversion by various anaerobic bacteria, including several Lactobacillus species, of lactose to glucose and galactose, ultimately producing lactic acid. These conversions are dependent on both permease and β-galactosidase as part of the lac operon. After selection for rapid fermentation for the production of yogurt, one Lactobacillus subspecies lost its ability to regulate lac operon expression [Lapierre, L., et al. (2002). J. Bacteriol. 184:928–935]. Would you consider it likely that in this subspecies the lac operon is on or off? What genetic events would likely contribute to the loss of regulation as described above?
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Textbook Question
Both attenuation of the trp operon in E. coli and riboswitches in B. subtilis rely on changes in the secondary structure of the leader regions of mRNA to regulate gene expression. Compare and contrast the specific mechanisms in these two types of regulation with that involving short noncoding RNAs (sRNAs).
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Textbook Question
Keeping in mind the life cycle of bacteriophages discussed earlier in the text (see Chapter 6), consider the following problem: During the reproductive cycle of a temperate bacteriophage, the viral DNA inserts into the bacterial chromosome where the resultant prophage behaves much like a Trojan horse. It can remain quiescent, or it can become lytic and initiate a burst of progeny viruses. Several operons maintain the prophage state by interacting with a repressor that keeps the lytic cycle in check. Insults (ultraviolet light, for example) to the bacterial cell lead to a partial breakdown of the repressor, which in turn causes the production of enzymes involved in the lytic cycle. As stated in this simple form, would you consider this system of regulation to be operating under positive or negative control?
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