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Ch. 15 - Gene Mutation, DNA Repair, and Transposition
Chapter 15, Problem 31

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Insertion in Exon 1, causing frameshift

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1
<span>Identify the location of the mutation: The mutation is an insertion in Exon 1 of the IL2RG gene.</span>
<span>Understand the type of mutation: The insertion causes a frameshift, which alters the reading frame of the gene.</span>
<span>Consider the impact of a frameshift: A frameshift mutation changes the grouping of nucleotides into codons, potentially altering every amino acid encoded after the mutation.</span>
<span>Predict the effect on the protein: The frameshift likely results in a completely different sequence of amino acids from the point of mutation onward, possibly introducing a premature stop codon.</span>
<span>Conclude the potential outcome: The altered protein may be nonfunctional or truncated, affecting the cytokine receptor's role in immune system development.</span>

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

Gene Structure and Function

The IL2RG gene is composed of exons and introns, with exons coding for the protein and introns being non-coding regions. Understanding the structure is crucial as mutations can disrupt the normal sequence, affecting the gene's ability to produce functional proteins. The gene's regulatory sequences also play a role in transcription and translation, influencing how the gene is expressed.
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Types of Mutations

Mutations can be classified into several types, including point mutations, insertions, deletions, and frameshifts. An insertion in Exon 1 that causes a frameshift alters the reading frame of the gene, potentially leading to a completely different and nonfunctional protein. This type of mutation can have severe consequences, especially in critical genes like IL2RG that are vital for immune function.
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Cytokine Receptors and Immune Function

Cytokine receptors are proteins that bind cytokines, which are signaling molecules crucial for immune responses. The IL2RG gene product is a component of these receptors, and its proper function is essential for the development and activation of immune cells. Mutations that affect this protein can lead to severe combined immunodeficiency (SCID), highlighting the importance of cytokine signaling in maintaining a functional immune system.
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Related Practice
Textbook Question

Shown below are two homologous lengths of the alpha and beta chains of human hemoglobin. Consult a genetic code dictionary (Figure 13.7), and determine how many amino acid substitutions may have occurred as a result of a single nucleotide substitution. For any that cannot occur as a result of a single change, determine the minimal mutational distance.

Alpha: ala val ala his val asp asp met pro
Beta: gly leu ala his leu asp asn leu lys

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Textbook Question
It has been noted that most transposons in humans and other organisms are located in noncoding regions of the genome—regions such as introns, pseudogenes, and stretches of particular types of repetitive DNA. There are several ways to interpret this observation. Describe two possible interpretations. Which interpretation do you favor? Why?
423
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Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Nonsense mutation in a coding region

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Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Insertion in Exon 7, causing frameshift

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Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Missense mutation

319
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Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Deletion in Exon 2, causing frameshift

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