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Ch. 15 - Gene Mutation, DNA Repair, and Transposition
Chapter 15, Problem 31

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Missense mutation

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1
Identify the location of the missense mutation within the IL2RG gene, which consists of eight exons.
Understand that a missense mutation results in a single nucleotide change that leads to the substitution of one amino acid for another in the protein sequence.
Consider the potential impact of the amino acid substitution on the protein's structure and function, especially if the substitution occurs in a critical region of the protein.
Evaluate whether the new amino acid has similar properties (e.g., charge, size, hydrophobicity) to the original amino acid, which might mitigate the impact of the mutation.
Assess the overall effect on the IL2RG protein's role in cytokine receptor function and immune system development, considering that even a single amino acid change can significantly alter protein activity.

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

IL2RG Gene Function

The IL2RG gene encodes a protein that is a critical component of the common gamma chain (γc) of cytokine receptors. This protein is essential for the signaling of several interleukins, which are vital for the development and function of immune cells. Mutations in this gene can disrupt the normal signaling pathways, leading to severe combined immunodeficiency (SCID) due to impaired immune responses.
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Functional Genomics

Types of Mutations

Mutations can be classified into several types, including missense, nonsense, and frameshift mutations. A missense mutation results in a single amino acid change in the protein sequence, which can affect the protein's structure and function. Understanding the type of mutation is crucial for predicting how it may alter the IL2RG gene product and its role in immune system development.
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Mutations and Phenotypes

Protein Structure and Function

The structure of a protein is directly related to its function, as the specific arrangement of amino acids determines how the protein interacts with other molecules. In the case of the IL2RG gene product, any alteration caused by a mutation can lead to improper folding or stability, potentially impairing its ability to form functional cytokine receptors. This disruption can have significant consequences for immune system functionality.
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Related Practice
Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Nonsense mutation in a coding region

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Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Insertion in Exon 1, causing frameshift

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Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Insertion in Exon 7, causing frameshift

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Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Deletion in Exon 2, causing frameshift

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Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Deletion in Exon 2, in frame

282
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Textbook Question

Mutations in the IL2RG gene cause approximately 30 percent of severe combined immunodeficiency disorder (SCID) cases in humans. These mutations result in alterations to a protein component of cytokine receptors that are essential for proper development of the immune system. The IL2RG gene is composed of eight exons and contains upstream and downstream sequences that are necessary for proper transcription and translation. Below are some of the mutations observed. For each, explain its likely influence on the IL2RG gene product (assume its length to be 375 amino acids).

Large deletion covering Exons 2 and 3

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