Freeman 8th EditionCh. 16+17 - Transcription, RNA Processing, and TranslationProblem 14Chapter 16, Problem 14
If you wanted to use αα-amanitin to shut down 95 percent of transcription by RNA polymerase II, roughly what concentration of αα-amanitin would you use? Note that the scale on the x-axis of the graph in Question 13 is logarithmic rather than linear, so that each tick mark shows a tenfold higher concentration.
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Toxins like αα-amanitin are used for research in much the same way as null mutants (Chapter 16)—to disrupt a process and see what happens when it no longer works. Researchers examined the ability of αα-amanitin to inhibit different RNA polymerases. They purified RNA polymerases I, II, and III from rat liver, incubated the enzymes with different concentrations of αα-amanitin, and then tested their activity. The results of this experiment are shown here. These findings suggest that cells treated with αα-amanitin will have a reduced level of: a. tRNAs b. rRNAs c. snRNAs d. mRNAs
A small portion of the human transport protein amino acid sequence is shown here. The upper sequence is associated with darker skin, and the lower sequence is associated with lighter skin. What DNA base-pair change created the light-skin form of the human protein from the gene that coded for the dark-skin form?
Researchers compared the amino acid sequences of the transport protein in zebrafish, puffer fish, mice, and humans. They found many stretches with identical sequences in all four species. Does this mean that the corresponding mRNA base sequences are also the same in these four species? Explain why or why not.
Biologists have investigated how fast pre-mRNA splicing occurs by treating cells with a toxin that blocks the production of new pre-mRNAs, then following the rate of splicing of the pre-mRNAs that were transcribed before adding the toxin. Why is addition of a toxin important in this study?
The allele of the human transport protein associated with lighter skin is found almost exclusively in people with European ancestry. The other common allele for darker skin, which appears to be the ancestral allele, is found in people with African ancestry. What is a plausible explanation for how the lighter-skin allele came to be so common in those with European ancestry?
The primary cause of death from αα-amanitin poisoning is liver failure. Suppose a physician informs you that liver cells die because their rate of protein production falls below a level needed to maintain active metabolism. Given that αα-amanitin is an inhibitor of transcription, you wonder if this information is correct. Propose an experiment to determine whether the toxin also has an effect on protein synthesis.