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Ch. 17 - Transcription, RNA Processing, and Translation
Freeman - Biological Science 8th Edition
Freeman8th EditionBiological ScienceISBN: 9780138276263Not the one you use?Change textbook
Chapter 17, Problem 16

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Eating even a single death cap mushroom (Amanita phalloides) can be fatal due to a compound called α-amanitin, a toxin that inhibits transcription.
The primary cause of death from α-amanitin poisoning is liver failure. Suppose a physician informs you that liver cells die because their rate of protein production falls below a level needed to maintain active metabolism. Given that α-amanitin is an inhibitor of transcription, you wonder if this information is correct. Propose an experiment to determine whether the toxin also has an effect on protein synthesis.

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Formulate a hypothesis: Since α-amanitin is known to inhibit transcription, hypothesize that it indirectly affects protein synthesis by reducing mRNA availability, which is required for translation.
Design an experiment: Use two groups of cultured liver cells. Treat one group with α-amanitin (experimental group) and leave the other untreated (control group). Ensure all other conditions are identical for both groups.
Measure transcription levels: Use a technique like quantitative PCR (qPCR) to measure the levels of mRNA in both groups. This will confirm whether α-amanitin is effectively inhibiting transcription in the experimental group.
Measure protein synthesis: Incorporate a radioactive or fluorescently labeled amino acid (e.g., radiolabeled methionine) into the culture medium. After a set period, measure the incorporation of the labeled amino acid into proteins in both groups using techniques like autoradiography or fluorescence detection.
Analyze results: Compare the levels of protein synthesis between the experimental and control groups. If protein synthesis is significantly reduced in the experimental group, it suggests that α-amanitin indirectly affects protein synthesis by inhibiting transcription and reducing mRNA availability.

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

Transcription and Translation

Transcription is the process by which messenger RNA (mRNA) is synthesized from a DNA template, while translation is the subsequent process where ribosomes synthesize proteins based on the mRNA sequence. Understanding these processes is crucial because αα-amanitin inhibits transcription, which directly impacts the production of mRNA and, consequently, protein synthesis.
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Effects of αα-amanitin

αα-amanitin is a potent inhibitor of RNA polymerase II, the enzyme responsible for synthesizing mRNA in eukaryotic cells. By inhibiting this enzyme, αα-amanitin reduces the production of mRNA, leading to decreased protein synthesis. This understanding is essential for designing experiments to assess the impact of the toxin on liver cell function and viability.
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Experimental Design

To determine the effect of αα-amanitin on protein synthesis, an experiment could involve treating cultured liver cells with varying concentrations of the toxin and measuring protein levels using techniques like Western blotting or ELISA. This approach allows for the quantification of protein production and helps establish a direct correlation between αα-amanitin exposure and the rate of protein synthesis.
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Related Practice
Textbook Question

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Eating even a single death cap mushroom (Amanita phalloides) can be fatal due to a compound called α-amanitin, a toxin that inhibits transcription.

Toxins like α-amanitin are used for research in much the same way as null mutants (Chapter 16)—to disrupt a process and see what happens when it no longer works. Researchers examined the ability of α-amanitin to inhibit different RNA polymerases. They purified RNA polymerases I, II, and III from rat liver, incubated the enzymes with different concentrations of α-amanitin, and then tested their activity. The results of this experiment are shown here. These findings suggest that cells treated with α-amanitin will have a reduced level of:

a. tRNAs

b. rRNAs

c. snRNAs

d. mRNAs

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Textbook Question

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Eating even a single death cap mushroom (Amanita phalloides) can be fatal due to a compound called α-amanitin, a toxin that inhibits transcription.

If you wanted to use α-amanitin to shut down 95 percent of transcription by RNA polymerase II, roughly what concentration of α-amanitin would you use? Note that the scale on the x-axis of the graph in Question 13 is logarithmic rather than linear, so that each tick mark shows a tenfold higher concentration.

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Textbook Question

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Eating even a single death cap mushroom (Amanita phalloides) can be fatal due to a compound called α-amanitin, a toxin that inhibits transcription.

Biologists have investigated how fast pre-mRNA splicing occurs by treating cells with a toxin that blocks the production of new pre-mRNAs, then following the rate of splicing of the pre-mRNAs that were transcribed before adding the toxin. Why is addition of a toxin important in this study?

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