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Ch. 9 - The Molecular Biology of Translation
Chapter 9, Problem 6

Describe three features of tRNA molecules that lead to their correct charging by tRNA synthetase enzymes.

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Identify the structure of tRNA: tRNA molecules have a cloverleaf structure with an acceptor stem, D-loop, anticodon loop, and TψC loop. The acceptor stem is crucial for the attachment of amino acids.
Understand the role of the anticodon: The anticodon loop contains a specific sequence of three nucleotides that pairs with the corresponding codon on mRNA, ensuring the correct amino acid is added during protein synthesis.
Recognize the importance of the acceptor stem: The 3' end of the tRNA, specifically the CCA tail, is where the amino acid is covalently attached by the tRNA synthetase enzyme.
Explore the specificity of tRNA synthetase: Each tRNA synthetase enzyme is specific to one amino acid and its corresponding tRNA(s). The enzyme recognizes the correct tRNA through specific interactions with the anticodon and other structural features of the tRNA.
Consider the proofreading mechanism: Some tRNA synthetases have proofreading abilities to ensure the correct amino acid is attached to the tRNA, preventing errors in protein synthesis.

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

tRNA Structure

Transfer RNA (tRNA) molecules have a unique cloverleaf structure that allows them to fold into a three-dimensional shape. This structure includes an anticodon region that pairs with the corresponding codon on mRNA, and an acceptor stem where the amino acid is attached. The specific shape and regions of tRNA are crucial for its recognition and interaction with tRNA synthetase enzymes.
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Aminoacyl-tRNA Synthetase

Aminoacyl-tRNA synthetases are enzymes that catalyze the attachment of amino acids to their corresponding tRNA molecules, a process known as 'charging.' Each synthetase is specific to one amino acid and its corresponding tRNA, ensuring that the correct amino acid is linked to the appropriate tRNA. This specificity is vital for accurate protein synthesis.
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Recognition and Specificity

The correct charging of tRNA by synthetase enzymes relies on recognition elements within the tRNA structure, such as the anticodon and specific nucleotide sequences in the acceptor stem. These features allow the synthetase to distinguish between different tRNAs and ensure that each tRNA is charged with the correct amino acid, which is essential for maintaining the fidelity of protein translation.
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