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Ch. 11 - DNA Replication and Recombination
Chapter 11, Problem 20

Several temperature-sensitive mutant strains of E. coli display the following characteristics. Predict what enzyme or function is being affected by each mutation. Supercoiled strands remain after replication, which is never completed.

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1
Identify the normal process of DNA replication in E. coli, focusing on the role of enzymes involved in unwinding and relieving supercoiling.
Understand that during DNA replication, the DNA must be unwound and supercoiling must be relieved to allow the replication machinery to access the DNA strands.
Recognize that topoisomerases are enzymes responsible for relieving supercoiling by cutting the DNA strands, allowing them to rotate and relieve tension, and then rejoining the strands.
Consider that if supercoiled strands remain after replication, it suggests a malfunction in the enzyme responsible for relieving supercoiling, likely a topoisomerase.
Predict that the mutation affects the function of a topoisomerase enzyme, preventing it from relieving supercoiling, which in turn hinders the completion of DNA replication.

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

DNA Supercoiling

DNA supercoiling refers to the over- or under-winding of the DNA double helix, which is crucial for DNA replication and transcription. In prokaryotes like E. coli, supercoiling helps compact the DNA and maintain its structure. If supercoiled strands remain after replication, it indicates that the DNA is not being properly unwound and separated, which can hinder the completion of replication.
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Topoisomerases

Topoisomerases are enzymes that manage DNA supercoiling by introducing or removing twists in the DNA strands. They play a critical role during DNA replication by relieving the tension that builds up ahead of the replication fork. Mutations affecting topoisomerases can lead to incomplete replication, as the DNA cannot be properly unwound, resulting in supercoiled strands.
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Temperature-Sensitive Mutations

Temperature-sensitive mutations are genetic alterations that result in a protein being functional at one temperature but non-functional at another. In the context of E. coli, these mutations can affect enzymes involved in DNA replication, such as topoisomerases. At non-permissive temperatures, the affected enzyme may fail to function, leading to issues like incomplete replication and the accumulation of supercoiled DNA.
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Mutations and Phenotypes
Related Practice
Textbook Question
Several temperature-sensitive mutant strains of E. coli display the following characteristics. Predict what enzyme or function is being affected by each mutation. Okazaki fragments accumulate, and DNA synthesis is never completed.
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Textbook Question
Several temperature-sensitive mutant strains of E. coli display the following characteristics. Predict what enzyme or function is being affected by each mutation. No initiation occurs.
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Textbook Question
Several temperature-sensitive mutant strains of E. coli display the following characteristics. Predict what enzyme or function is being affected by each mutation. Synthesis is very slow.
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Textbook Question
While many commonly used antibiotics interfere with protein synthesis or cell wall formation, clorobiocin, one of several antibiotics in the aminocoumarin class, inhibits the activity of bacterial DNA gyrase. Similar drugs have been tested as treatments for human cancer. How might such drugs be effective against bacteria as well as cancer?
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Textbook Question
In 1994, telomerase activity was discovered in human cancer cell lines. Although telomerase is not active in most human adult cells, all cells do contain the genes for telomerase proteins and telomerase RNA. Since inappropriate activation of telomerase may contribute to cancer, why do you think the genes coding for this enzyme have been maintained in the human genome throughout evolution? Are there any types of human body cells where telomerase activation would be advantageous or even necessary? Explain.
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Textbook Question
The genome of D. melanogaster consists of approximately 1.7x10⁸ base pairs. DNA synthesis occurs at a rate of 30 base pairs per second. In the early embryo, the entire genome is replicated in five minutes. How many bidirectional origins of synthesis are required to accomplish this feat?
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