Intro to Urea Cycle - Online Tutor, Practice Problems & Exam Prep

The urea cycle is an energy-consuming pathway that converts toxic ammonium ions into urea for excretion. It occurs in two phases: the preparation phase, where ammonium ions are converted into carbamoyl phosphate using ATP and carbon dioxide from the mitochondrial matrix, and the conversion phase, which produces urea from carbamoyl phosphate and aspartate, also consuming ATP. Urea, a carbonyl compound with two amino groups, is produced in the cytosol, highlighting the cycle's importance in nitrogen metabolism.

Intro to Urea Cycle Concept 1

Hey, everyone. In this video, we're going to take a look at the intro to the urea cycle. Now, the urea cycle converts the toxic ammonium ion into urea for excretion into urine. Now, here, this is an energy-spending pathway. And because it's energy-spending, we're going to say it uses energy from the hydrolysis of ATP. If we take a look here, remember when it comes to this process, we're going to say that the urea cycle, we have glutamate here which undergoes oxidative deamination. It's going to help to create the ammonium ion which then enters the urea cycle. We're going to say, at the end of the urea cycle, we're going to produce our urea molecule, which is basically a carbonyl here with NH₂ groups on both sides. So, this is an NH₂ and this is an NH₂. This represents our urea molecule. And realize here that the urea is produced within the cytosol. So, we're going to say here the Ammonium ions, they are prepared for the pathway in the mitochondrial matrix, and the cycle concludes in the cytosol producing urea. Alright. So we'll go into greater details, but this is a broad overview of what happens when it comes to the urea cycle: how the ammonium ion enters it, and then we are secreting urea outside, in the cytosol.

Intro to Urea Cycle Example 1

Here it says, what is the source of energy that drives the Urea Cycle? So remember the Urea Cycle here, it's going to help convert the toxic Ammonium Ion into urea. It is expelled in our urine. Remember, it's produced within the cytosol, and it is an energy-consuming pathway. And because of that, we need a source of energy. Here, it happens through the hydrolysis of our ATP molecule. If we take a look here at all the options, it wouldn't be through the oxidation of electron carriers. It's not the hydrolysis of Acetyl CoA. Again, it's the hydrolysis of ATP. So, c is our answer. And then here, no energy is required to run this urea cycle. That is not true. It is an energy-spending pathway so it requires energy. And again, that source of energy comes through the hydrolysis of ATP.

Intro to Urea Cycle Concept 2

When it comes to the phases of the urea cycle, we're going to say the urea cycle takes place in two phases. Phase A is our preparation phase, and Phase B is our conversion phase. In the preparation phase, we convert our Ammonium ions into Carbamoyl Phosphate. This consumes ATP and uses Carbon Dioxide found within the mitochondrial matrix. In the conversion step, it produces urea from the Carbamoyl Phosphate as well as from the Aspartate molecule. This phase also consumes ATP. If we take a look here, we have our ammonium ion, and we're going to have the injection of Carbon Dioxide again from the mitochondrial matrix as well as the consumption of ATP. This will help create the carbonyl phosphate group. This represents our urea cycle.

Here we're crossing the mitochondrial matrix with this orange line. We're going to say that in Phase B, we are producing urea, which remember is a carbonyl, with two NH₂ groups attached. This happens because of the Carbonyl Phosphate as well as Aspartate. And again, remember in Phase B, we also have the consumption of another ATP molecule. This is an energy-demanding pathway; we require the use of ATP in order to complete both phases of the urea cycle.

Intro to Urea Cycle Example 2

Here it says, which of the following statements is correct about the urea cycle? Carbonyl Phosphate is produced in the cytosol from oxidation of amino acids. So Carbamoyl Phosphate is not produced in the cytosol; it's produced within the mitochondrial matrix. So already we know that is incorrect. The Ammonium ions from oxidative deamination are fed directly to the urea cycle. That's wrong too because remember, in phase a, we have preparation where we convert the ammonium ions into Carbamoyl Phosphate. That's what goes into the urea cycle directly. The urea cycle produces energy in the form of ATP molecules. No. Both phases a and b consume ATP molecules. They don't create them. Here, urea is produced from Carbamoyl Phosphate and Aspartate. This is true. So out of all the statements within this question, only option d is the correct answer.

Which of the following statements accurately describes the structure of urea?

• A. A carbonyl group bonded to two –NH₂ groups.
• B. A C atom double bonded to two N atoms.
• C. A carbonyl group bonded to a –CH₃ group and a –NH₂ group.
• D. A carbonyl group bonded to two –OH groups.

Here’s what students ask on this topic:

What is the urea cycle and why is it important?

The urea cycle is a metabolic pathway that converts toxic ammonium ions (NH₄⁺) into urea, which is then excreted in urine. This process is crucial for removing excess nitrogen from the body, thereby preventing the accumulation of toxic levels of ammonium. The cycle occurs in two phases: the preparation phase, where ammonium ions are converted into carbamoyl phosphate using ATP and carbon dioxide, and the conversion phase, which produces urea from carbamoyl phosphate and aspartate, also consuming ATP. Urea is produced in the cytosol and highlights the cycle's importance in nitrogen metabolism.

What are the two phases of the urea cycle?

The urea cycle consists of two phases: the preparation phase and the conversion phase. In the preparation phase, ammonium ions (NH₄⁺) are converted into carbamoyl phosphate using ATP and carbon dioxide (CO₂) from the mitochondrial matrix. In the conversion phase, urea is produced from carbamoyl phosphate and aspartate, also consuming ATP. The preparation phase occurs in the mitochondrial matrix, while the conversion phase takes place in the cytosol, ultimately producing urea for excretion.

How does the urea cycle utilize ATP?

The urea cycle is an energy-consuming pathway that requires ATP in both of its phases. In the preparation phase, ATP is used to convert ammonium ions (NH₄⁺) and carbon dioxide (CO₂) into carbamoyl phosphate. In the conversion phase, additional ATP is consumed to produce urea from carbamoyl phosphate and aspartate. This energy expenditure is necessary to facilitate the biochemical reactions that detoxify ammonium ions and produce urea for excretion.

Where does the urea cycle take place in the cell?

The urea cycle takes place in two cellular compartments: the mitochondrial matrix and the cytosol. The preparation phase, where ammonium ions (NH₄⁺) are converted into carbamoyl phosphate, occurs in the mitochondrial matrix. The conversion phase, which produces urea from carbamoyl phosphate and aspartate, occurs in the cytosol. This compartmentalization is essential for the efficient functioning of the urea cycle and the detoxification of ammonium ions.

What is the role of carbamoyl phosphate in the urea cycle?

Carbamoyl phosphate plays a crucial role in the urea cycle as an intermediate that facilitates the conversion of toxic ammonium ions (NH₄⁺) into urea. In the preparation phase, ammonium ions and carbon dioxide (CO₂) are converted into carbamoyl phosphate using ATP. This compound then enters the conversion phase, where it reacts with aspartate to produce urea. The formation and utilization of carbamoyl phosphate are essential steps in detoxifying ammonium ions and producing urea for excretion.